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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866492.1_cds_XP_016432701.1_28918
CDS Infomation

[gene=LOC107759323] [db_xref=GeneID:107759323] [protein=LOW QUALITY PROTEIN: peroxisome biogenesis protein 6] [transl_except=(pos:1492..1494,aa:Other),(pos:1546..1548,aa:Other)] [protein_id=XP_016432701.1] [location=complement(join(48892..48981,49234..49314,49743..49887,49965..50086,50393..50431,50519..50629,50706..50828,50934..51020,51206..51277,51610..51971,52483..52510,52881..53109,53739..53880,54533..54776,54863..55489,56271..56507))] [gbkey=CDS]
Sequence

ATGGTGGAAAAAAGGAAACCTTTAGTTCTTTCTTCCACTAAAAATCTACTAAATTCACTT
TTAAATTCAGAAAATAAATCCCAGATTGAAACCCAAATTCCATTTTTGCCAAAAGTACAA
TTGAGAGCTGGAGTTCTTAAAATATCAAAAGACGACATTGTTAATCTTGATGATTCTGCT
TTGGTGGGGATAACTACTTCTCAACTTAGAAGACTTTGTATTACTTCCGGCTCACTGGTA
CTCATTAAAAATGTCAATACAAGTCAACAAAGAATTGGACAAGTGGTAGTTCTAGATCCT
CCTAGTTGTGACCAAGTTTTATCCGGACGTAGCTCATCACTGCCACATTCCTCCGGGATA
GCATTTCTCTTGCCATTATATAGCTATCATGATTCTCATATAAAACCAGATGGAGAAGTT
GCCTATTTATCTCCGATTCTAGCATTTAACCTTAATTTACATTTGTCATGCTTGAAATCA
ATGATTCAACAAGGGAAAGAAGCTTTGTCACCACTATTTGAGGCCAAATCGAATAACATA
GTGAGTGGAAAAGACAATGTTCTCGTCACTCTAGAATTTGAACCTTTGGATCAGTTGCCA
AAATATGCCACACACCTGCGGGCTTCTTTTGTGAAGATACCAGAATGTGGGAGTCTAGAT
TCAGTTAAAAAAGATTCATCTACAGAAGCTGAAGACCGTCAAGAGTTGATCGATATAGAA
TTGAACAAGTACTTTGAAGTAGATAGACTTCTTTCGAGAGGTGATCTTTTCAGTGTATGC
ATCAATTGGGATTGCAAATCGGCTCTGTGCATCCCTTGCAGTCAAAAGAAGCAAAATGGT
GGTTCTGACCTCATCTATTTCAAGGTTGTGGCCATGGAACCTTCTGAAGAACCTATCCTA
AGAGTCAACCGTACTCGAACTGCCCTTGTACTTGGAGGGAGTGTACCTTCTGCTGTTCCT
CCAGATTTCTTAGTTCCTCGACCGCGAGGTTCTCTGCCTTTACAAATGAGCACTGTGAAG
ACTTTAGCCTCCATACTTATGCCACCATTATGTCCATCAGCCCTTTCATCAAAATTTCGA
GTTGCTGTGTTGTTGTATGGTTTGCCTGGGTGCGGGAAGAGAACTGTGGTTAAATTTGTT
GCTCGTCAATTAGGCCTTCATGTGGTGGAATTTAACTGTCAAAGTGTATTTGCAAATTCT
GATAGAAAAACATCTTTTGCCCTAGCTGAAGCTTTCGGCATGGCTCGCAGATACTCGCCT
ACAATCCTTCTTCTTCACCATTTTGAGGTCTTCAAGAACCTGGTCTCTCACGAGGGTTCA
CCACATGACCAAGTTGGTATGAACTTAGAGGTTGCATCCGTCATAAAGGAATTTACTGAG
CCAGTTGCTGAAGATGAAGAAATCTACTCAGAGGGAAAGTCAAATGCTCATGACGTAAGA
TGTATTCCAAGTTCCTTTACTTTTCATGTCTCCGTGTCCGTTGTCCGCTCATAGTCATAC
GAGCTAAGACCCTCATCTCTTCCTTTCTGTTATTTTCTAGATTACTGAAGTTGTGGGTGT
CATTTGTTGTCGTTTTTATTGCAGACTTCTTTGGAGGACCTTGTGAAAGATTTGGTTGGT
CAGACATCAGGATTCATGCCAAGAGATCTGCGAGCTTTAGTTGCTGATTCCGGTGCAAAT
CTAGTCCTTAGTCGTGGTAGTGAGGAAGTCGAGGTTGAGAATGGAAATCTGAAAGAGCTT
TCTCATGAGAGCAAGCCAATCGAGAATAATGGCTCGCATGACTCGACAAAGTCCCTAAGC
AAAGAAGATGTAATGAAATCACTGGAACGATCAAAGAAAAGAAATGCATCAGCACTGGGT
ACTCCAAAGGTTCCAAATGTCAAATGGGAAGATGTCGGTGGTCTTGAAGATGTGAAGAAA
TCAATTTTGGACACTGTACAGCTGCCTCTTTTACACAAGGACTTGTTTTCGTCTGGATTG
CGCAAGCGATCTGGTGTTCTTTTCTATGGCCCACCTGGTACAGGGAAAACTTTACTGGCA
AAAGCTGTTGCTACCGAATGCTCCCTGAATTTTCTCAGTGTGAAAGGGCCCGAGTTGATA
AACATGTACATAGGAGAGTCAGAGAAAAATATTCGGGACATTTTTCAGAAGGCTAGATCA
GCTCGACCATGTGTCATCTTCTTCGATGAGCTTGATTCTCTTGCTCCTGCCCGGGGTGCT
TCTGGAGACTCCGGCGGTGTAATGGATCGAGTGGTTTCTCAGATGCTTGCAGAGATTGAT
GGCTTGAACGACTCTACCCAGGACTTGTTTATTATTGGAGCTAGCAATAGGCCTGATCTT
ATTGATCCTGCCCTTTTGAGGCCAGGCCGATTTGATAAGCTCCTTTATGTTGGTGTGAAT
TCTGAAGCCTCTTATAGGGAGAGGGTCCTTAAAGCGCTTACACGGAAGTTTAAATTGAAA
GAAGATGTATCTCTACTCTCAATAGCAAAAAGGTGTCCTCCAAACTTCACAGGTGCTGAC
ATGTATGCACTGTGCGCTGATGCTTGGTTTAATGCTGCGAAACGCAAGGTATTAGCTGCC
AGTTCGGATTCAACTGGCTCAGATGATGTGGATGACTCGATCGTCGTGGAATATGATGAT
TTTTTAAAGGTCTTGGGAGAGATCTCTCCCTCGCTGTCAATGGCCGAGCTTCAAAAGTAT
GAGTTGCTCCGTGAACAGTTTGAAGGATCATCAAGATGA

Peptide Sequence

PEP ID

XP_016432701.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: peroxisome biogenesis protein 6 [Nicotiana tabacum]
Sequence

MVEKRKPLVLSSTKNLLNSLLNSENKSQIETQIPFLPKVQLRAGVLKISKDDIVNLDDSA
LVGITTSQLRRLCITSGSLVLIKNVNTSQQRIGQVVVLDPPSCDQVLSGRSSSLPHSSGI
AFLLPLYSYHDSHIKPDGEVAYLSPILAFNLNLHLSCLKSMIQQGKEALSPLFEAKSNNI
VSGKDNVLVTLEFEPLDQLPKYATHLRASFVKIPECGSLDSVKKDSSTEAEDRQELIDIE
LNKYFEVDRLLSRGDLFSVCINWDCKSALCIPCSQKKQNGGSDLIYFKVVAMEPSEEPIL
RVNRTRTALVLGGSVPSAVPPDFLVPRPRGSLPLQMSTVKTLASILMPPLCPSALSSKFR
VAVLLYGLPGCGKRTVVKFVARQLGLHVVEFNCQSVFANSDRKTSFALAEAFGMARRYSP
TILLLHHFEVFKNLVSHEGSPHDQVGMNLEVASVIKEFTEPVAEDEEIYSEGKSNAHDVR
CIPSSFTFHVSVSVVRSXSYELRPSSLPFCYFLDYXSCGCHLLSFLLQTSLEDLVKDLVG
QTSGFMPRDLRALVADSGANLVLSRGSEEVEVENGNLKELSHESKPIENNGSHDSTKSLS
KEDVMKSLERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL
RKRSGVLFYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNIRDIFQKARS
ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFIIGASNRPDL
IDPALLRPGRFDKLLYVGVNSEASYRERVLKALTRKFKLKEDVSLLSIAKRCPPNFTGAD
MYALCADAWFNAAKRKVLAASSDSTGSDDVDDSIVVEYDDFLKVLGEISPSLSMAELQKY
ELLREQFEGSSR

Transcript Sequence

Gene sequence data has not been registered.